Skip to main content

Codominance, incomplete dominance and multiple alleles explained: HSC Biology Module 5

Syllabus dot point

“Investigate the inheritance patterns including but not limited to: codominance, incomplete dominance, multiple alleles”

12 min read

Quick answer

Codominance produces a heterozygote that expresses both alleles simultaneously (e.g. AB blood type, or roan cattle with red and white hairs), incomplete dominance produces an intermediate heterozygote (e.g. pink snapdragons from red and white parents), and multiple alleles describe genes like the ABO blood group that have three or more alleles in the population even though each individual still carries only two. Any heterozygote x heterozygote cross of a single gene gives a 1:2:11:2:1 genotypic ratio, which is also the phenotypic ratio for these patterns because each genotype looks different.

Jump to a section
  1. What this dot point is asking
  2. The answer
  3. Examples in context
  4. Exam-style questions
  5. Practice questions

What this dot point is asking

NESA wants you to explain non-Mendelian inheritance patterns: codominance, incomplete dominance, and multiple alleles. Each is a real deviation from the simple dominant-recessive model Mendel described. The most common worked exam example is the ABO blood group system, which combines codominance and multiple alleles.

The command words matter. "Distinguish" or "compare" wants the difference made explicit (both-visible versus intermediate-blend). "Predict the ratio" or "show your working" wants a labelled Punnett square with a key and the correct genotypes - the working earns marks even when the final ratio is right.

The answer

Codominance

In codominance, both alleles in a heterozygote are fully and simultaneously expressed. The phenotype shows both traits side by side, NOT blended.

Notation. Use uppercase letters with superscripts. For ABO blood groups: IAI^A and IBI^B are codominant.

Standard worked example: ABO blood groups.

An individual with IAIBI^A I^B produces both the A antigen and the B antigen on their red blood cells, so they have blood type AB. Both alleles are expressed; neither dominates.

Another classic example is the MN blood group, where heterozygotes have both M and N antigens.

Incomplete dominance

In incomplete dominance, the heterozygote shows an intermediate phenotype between the two homozygotes, as if the alleles had been blended.

Notation. Use uppercase letters or different letter pairs.

Standard worked example: snapdragon flower colour.

Red snapdragons (RRRR) crossed with white snapdragons (rrrr) produce all pink (RrRr) heterozygotes in the F1 generation. The pink colour is intermediate between red and white. Neither allele dominates fully.

If you cross two pink heterozygotes (Rr×RrRr \times Rr), the F2 ratio is 1 red : 2 pink : 1 white (genotypic and phenotypic ratios are the same here, because each genotype produces a distinct phenotype).

Incomplete dominance: Rr x Rr snapdragon cross giving a 1 red : 2 pink : 1 white ratio A two by two Punnett square for a cross between two pink heterozygous snapdragons, each genotype R r. The father gametes R and r label the two columns; the mother gametes R and r label the two rows. The four cells contain RR shaded deep red, Rr shaded pink, Rr shaded pink and rr shown white. The heterozygote is an intermediate blended pink. The phenotypic ratio is one red to two pink to one white. Incomplete dominance pink × pink (Rr × Rr) father gametes R r R r mother gametes RR Rr Rr rr red pink pink white Phenotypes: 1 red : 2 pink : 1 white heterozygote = intermediate blend Key: R = red allele, r = white allele. One R dose makes pale (pink) pigment.

Codominance vs incomplete dominance at a glance

Feature Codominance Incomplete dominance
Heterozygote phenotype Both parental traits visible side by side Intermediate (blended) between parental traits
Example IAIBI^A I^B = AB blood type RrRr = pink snapdragon
Key word Both Intermediate
Key fact

Codominance: heterozygote shows BOTH alleles' traits at once (AB blood = both A and B antigens). Incomplete dominance: heterozygote shows an INTERMEDIATE blend (pink, between red and white). Any heterozygote x heterozygote cross of one gene gives a 1:2:11:2:1 genotypic ratio - and for these two patterns the phenotypic ratio is also 1:2:11:2:1 because every genotype looks different.

Multiple alleles

Most genes in textbooks have just two alleles (e.g. A and a). In reality, many genes have multiple alleles in the population.

Worked example: ABO blood groups.

There are three alleles for the ABO gene: IAI^A, IBI^B, and ii.

  • IAI^A produces the A antigen.
  • IBI^B produces the B antigen.
  • ii produces no antigen.

IAI^A and IBI^B are codominant with each other. Both IAI^A and IBI^B are dominant over ii.

The six possible genotypes and four possible phenotypes:

Genotype Phenotype (blood type)
IAIAI^A I^A A
IAiI^A i A
IBIBI^B I^B B
IBiI^B i B
IAIBI^A I^B AB
iiii O

Individual people still only carry two alleles (one from each parent). The "multiple alleles" refers to the variety within the population.

ABO multiple alleles: three alleles give six genotypes and four blood groups A map of the ABO blood group gene. Three alleles are listed at the top: I superscript A makes the A antigen, I superscript B makes the B antigen, and i makes no antigen. I A and I B are codominant with each other and both are dominant over i. Below, six genotype boxes are grouped into four blood groups: I A I A and I A i give type A; I B I B and I B i give type B; I A I B gives type AB because both antigens are expressed; and i i gives type O with no antigen. Three alleles therefore produce four phenotypes. Codominance + multiple alleles (ABO) Three alleles in the population Iᴬ Iᴮ i A antigen B antigen no antigen Iᴬ and Iᴮ codominant · both dominant over i give four blood groups Type A Iᴬ Iᴬ Iᴬ i Type B Iᴮ Iᴮ Iᴮ i Type AB Iᴬ Iᴮ both antigens (codominant) Type O i i no antigen (recessive) 3 alleles → 6 genotypes → 4 phenotypes Each person carries only two of the three alleles. AB shows both traits; this is why it is codominance, not a blend.

Worked ABO cross

Father type A heterozygous (IAiI^A i) × Mother type B heterozygous (IBiI^B i).

IAI^A ii
IBI^B IAIBI^A I^B IBiI^B i
ii IAiI^A i iiii

Genotypes: 1 IAIBI^A I^B : 1 IBiI^B i : 1 IAiI^A i : 1 iiii.
Phenotypes: 1 AB : 1 B : 1 A : 1 O.

All four blood types are possible offspring in this cross.

Model exam answers

Worked example 1 - distinguish and apply (3 marks)

Question. Eggplant fruit comes in three colours: dark purple, white and violet. A cross between dark purple and white eggplants always produces violet offspring. Name the inheritance pattern, and predict the phenotypic ratio when two violet offspring are crossed. Show your working with a key.

Model answer. The pattern is incomplete dominance: dark purple x white gives an intermediate violet, so neither allele is fully dominant. Key: PP = purple allele, WW = white allele. Then dark purple = PPPP, white = WWWW, violet (intermediate) = PWPW. Crossing two violet plants, PW×PWPW \times PW:

P W
P PP PW
W PW WW

Phenotypic ratio dark purple : violet : white = 1:2:11 : 2 : 1.

Marker's note. Marks are for (1) identifying incomplete dominance from the intermediate F1, (2) a correct, keyed Punnett square with PWPW as the heterozygous violet, and (3) the correct 1:2:11:2:1 phenotypic ratio. Stating the key and the heterozygous genotype is what separates 3/3 from 2/3.

Worked example 2 - blood type paternity (3 marks)

Question. A woman with blood type O has a child with blood type AB. She claims a man with blood type A (genotype IAiI^A i) is the father. Use a Punnett square to determine whether he could be the biological father.

Model answer. The mother is type O, genotype iiii, so she can only pass ii. A type AB child has genotype IAIBI^A I^B, so the child must have received IBI^B from the father. Cross ii×IAiii \times I^A i:

IAI^A ii
ii IAiI^A i iiii
ii IAiI^A i iiii

The only possible children are type A (IAiI^A i) or type O (iiii). The man cannot contribute IBI^B, so an AB child is impossible. He is excluded as the biological father.

Marker's note. Full marks need the deduced parental genotypes (iiii and IAiI^A i), a correct square showing no IBI^B is available, and the explicit conclusion that an AB child is impossible, so he is excluded. A bare "no" without the genotype reasoning caps the response at 1 mark.

Worked example 3 - codominance versus incomplete dominance (4 marks)

Question
Using cattle coat colour and snapdragon flower colour, explain the difference between codominance and incomplete dominance at both the phenotype and molecular level.
Model answer
In shorthorn cattle, CRCWC^R C^W heterozygotes are roan: a coat of intermingled red and white hairs. Both alleles are fully expressed in different follicle cells, so both traits appear side by side - this is codominance. In snapdragons, RrRr heterozygotes are pink, a single uniform colour intermediate between red (RRRR) and white (rrrr) - this is incomplete dominance. At the molecular level, the codominant alleles each encode a different functional product that is made independently (red pigment in some cells, none in others), whereas in incomplete dominance the one functional RR allele makes only a reduced quantity of red pigment, so the whole flower looks pale pink. Both patterns give a 1:2:11:2:1 phenotypic ratio in a heterozygote cross.
Marker's note
Marks: (1) roan described as both colours visible together = codominance; (2) pink described as a uniform intermediate = incomplete dominance; (3) a molecular distinction (independent products versus reduced dosage of one product); (4) correct ratio or notation. The molecular account is what lifts a sound 3-mark answer to 4.
Common traps
Confusing codominance with incomplete dominance
Codominance = both visible (AB blood, both antigens; roan, both hair colours). Incomplete dominance = blended intermediate (pink, between red and white).
Wrong allele notation for ABO
Use IAI^A, IBI^B, and ii (lowercase i for recessive O). Writing A, B, O directly without the I superscript loses marks.
Forgetting that each person has only two alleles
Multiple alleles exist in the population, but each individual still inherits one allele from each parent (total two).
Assuming all O offspring need O parents
Two heterozygous parents (IAiI^A i × IBiI^B i, for example) can produce an O child even though neither parent is O.
Leaving out the key or the working
"Show your working" and Punnett-square questions award marks for the labelled square and stated key, not only the final ratio.
Exam technique
Read the command word
"Distinguish/compare" needs the explicit contrast (both-visible vs intermediate-blend); "predict the ratio" needs a labelled Punnett square; "explain" wants the molecular reason, not just the result.
Always give a key
NESA markers repeatedly note that a key (e.g. IAI^A = A antigen) is required to interpret a Punnett square. Write it even when it feels obvious.
State the ratio in the order phenotypes appear
For a heterozygote cross write 1:2:11:2:1 and name each phenotype - do not leave a bare ratio.
Use correct notation throughout
Superscript ABO alleles and consistent letters for incomplete dominance signal Band 5/6 control of the topic.
Note

Picture mixing paint. Incomplete dominance is like stirring red and white together to get one pink can - the colours blend into something in between. Codominance is like throwing red and white sprinkles on a cake: both stay visible, side by side, nothing blends. "Multiple alleles" just means a gene comes in more than two versions across all people, even though you personally only ever carry two of them - like a shirt that comes in many colours but you only own two. Blood type is the famous example: three versions of one gene give the four groups A, B, AB and O.

Examples in context

Example 1. Roan coat colour in Australian Shorthorn cattle. Shorthorn cattle exhibited at the Sydney Royal Easter Show often carry the classic codominance gene for coat colour. A red bull (CRCRC^R C^R) crossed with a white cow (CWCWC^W C^W) produces all roan (CRCWC^R C^W) calves. Roan animals do not have pink coats; they have individual red and white hairs intermingled across the body, both alleles expressed in different patches of follicle cells. NSW DPI breeding records show this pattern is fully predictable: roan-to-roan crosses give a 1 red : 2 roan : 1 white ratio in the calves. Stud breeders use this to plan their show entries years in advance.

Example 2. Blood transfusion compatibility at NSW pathology. When a patient at Royal Prince Alfred Hospital needs a transfusion, the pathology lab cross-matches ABO and Rh blood types because the codominance of IAI^A and IBI^B creates real clinical risk. A type O patient (iiii) has anti-A and anti-B antibodies in their plasma; transfusing type A or B blood would trigger antigen-antibody clumping and a potentially fatal haemolytic reaction. Type AB patients (IAIBI^A I^B) are "universal recipients" because they make neither anti-A nor anti-B. Type O blood (donor) is "universal" because its red cells lack both A and B antigens. The multiple-allele system explains why blood drives target O-negative donors most aggressively.

Exam-style questions

Questions in the style of NESA exam questions on this dot point, each with a worked answer. They are written by ExamExplained unless tagged "Past paper"; the year shows the paper a question is modelled on.

2019 HSC-style5 marks
Explain the phenotypic ratios of the F2 generation in both the plant and chicken breeding experiments. Include Punnett squares and a key to support your answer. [Graph A 'seed shape' shows a 3:1 F2 ratio; Graph B 'feather colour' shows a 1:2:1 F2 ratio; parents were pure-breeding.]
Show worked answer →

Top marks (5) require explaining both frequency ratios, drawing a suitable Punnett square for each trait, linking each square to its ratio and type of inheritance, and providing a key.

Sample answer (marking guidelines):

  • Graph A (3:1) is typical of simple dominant/recessive inheritance. Pure-breeding parents are RR (round) and rr (wrinkled); the F1 are all Rr (round). Selfing the F1 (Rr x Rr) gives RR, Rr, Rr, rr = 3 round : 1 wrinkled. Key: R = round, r = wrinkled.
  • Graph B (1:2:1) is typical of codominant (or incomplete dominance) alleles where both alleles are expressed/blended. F1 are heterozygous (F^B F^W). Crossing them gives F^B F^B, F^B F^W, F^B F^W, F^W F^W = 25% black : 50% black-and-white : 25% white. Key: F^B = black feathers, F^W = white feathers.

Markers stressed providing an appropriate key to aid interpretation of the Punnett squares.

Source: NESA 2019 HSC Biology examination and marking guidelines.

2022 HSC-style3 marks
Eggplant fruit comes in three colours: dark purple, white and violet. A genetic cross between the dark purple and white eggplants will always result in the violet phenotype. What phenotypic ratio would you expect to see when two violet offspring are crossed? Show your working.
Show worked answer →

3 marks for the correct phenotypic ratio plus correct parental genotypes and suitable working; 2 marks for partial combinations of these; 1 mark for some relevant information.

Sample answer (marking guidelines): Because dark purple x white always gives violet, neither allele is fully dominant (incomplete dominance / blending). Dark purple = PP, white = WW, violet = PW. Cross PW x PW:

P W
P PP PW
W PW WW

Phenotypic ratio dark purple : violet : white = 1 : 2 : 1.

Markers wanted accurate Punnett squares with a key and the correct heterozygous (PW) genotype for the violet phenotype.

Source: NESA 2022 HSC Biology examination and marking guidelines.

2019 HSC-style2 marks
The APOE gene has multiple alleles, including e2, e3 and e4. What are multiple alleles?
Show worked answer →

2 marks for a suitable definition; 1 mark for some relevant information.

Sample answer (marking guidelines): Alleles are different versions of a gene. 'Multiple alleles' refers to three or more versions of a gene existing in a population.

Markers warned against confusing multiple alleles with polygenic inheritance (many genes affecting one trait) - multiple alleles means three or more variants of a single gene.

Source: NESA 2019 HSC Biology examination and marking guidelines.

Practice questions

Original practice questions graded from foundation to exam level, each with a full worked solution. Try them before revealing the solution.

foundation2 marks
Distinguish between codominance and incomplete dominance. Use one example of each in your answer.
Show worked solution →

Mark 1 - codominance. In codominance both alleles in a heterozygote are fully and simultaneously expressed, so both parental traits appear side by side (not blended). Example: a person with genotype IAIBI^A I^B has blood type AB and makes both A and B antigens.

Mark 2 - incomplete dominance. In incomplete dominance the heterozygote shows an intermediate phenotype between the two homozygotes, as if the alleles were blended. Example: a red snapdragon (RRRR) crossed with a white snapdragon (rrrr) gives pink (RrRr) offspring.

The distinguishing idea markers look for: codominance = BOTH visible; incomplete dominance = an INTERMEDIATE blend.

foundation3 marks
Red snapdragons (RRRR) are crossed with white snapdragons (rrrr). State the F1 phenotype, then draw a Punnett square for an F1 x F1 cross and give the F2 phenotypic ratio.
Show worked solution →

Mark 1 - F1 phenotype. All F1 are RrRr and all are pink (the intermediate phenotype of incomplete dominance).

Mark 2 - Punnett square. Rr×RrRr \times Rr:

R r
R RR Rr
r Rr rr

Mark 3 - F2 ratio. Genotypes 1 RRRR : 2 RrRr : 1 rrrr, so phenotypes are 11 red : 22 pink : 11 white. The phenotypic ratio 1:2:11:2:1 equals the genotypic ratio because each genotype produces a distinct colour.

foundation2 marks
The ABO blood group gene has three alleles in the human population. Name the three alleles and state which are codominant and which is recessive.
Show worked solution →

Mark 1 - name the alleles. The three alleles are IAI^A, IBI^B and ii.

Mark 2 - dominance relationships. IAI^A and IBI^B are codominant with each other (both expressed in IAIBI^A I^B). Both IAI^A and IBI^B are dominant over the recessive allele ii, which codes for no antigen.

core3 marks
A type A father (genotype IAiI^A i) and a type B mother (genotype IBiI^B i) have children. Use a Punnett square to determine the possible blood types of their offspring and the ratio in which they are expected.
Show worked solution →

Mark 1 - correct gametes and square. Father IAiI^A i gives IAI^A or ii; mother IBiI^B i gives IBI^B or ii.

IAI^A ii
IBI^B IAIBI^A I^B IBiI^B i
ii IAiI^A i iiii

Mark 2 - genotypes to phenotypes. IAIBI^A I^B = AB, IBiI^B i = B, IAiI^A i = A, iiii = O.

Mark 3 - ratio. 11 AB : 11 B : 11 A : 11 O. All four blood groups are possible, each with probability 14\tfrac{1}{4}. This shows two non-O parents can have an O child.

core4 marks
In shorthorn cattle, coat colour shows codominance: CRCRC^R C^R is red, CWCWC^W C^W is white and CRCWC^R C^W is roan (red and white hairs intermingled). A roan bull is crossed with a roan cow. Predict the genotypic and phenotypic ratios of the calves, and explain why roan is evidence of codominance rather than incomplete dominance.
Show worked solution →

Mark 1 - Punnett square. CRCW×CRCWC^R C^W \times C^R C^W:

CRC^R CWC^W
CRC^R CRCRC^R C^R CRCWC^R C^W
CWC^W CRCWC^R C^W CWCWC^W C^W
Mark 2 - genotypic ratio
1 CRCR:2 CRCW:1 CWCW1\ C^R C^R : 2\ C^R C^W : 1\ C^W C^W.
Mark 3 - phenotypic ratio
11 red : 22 roan : 11 white (the ratio 1:2:11:2:1).
Mark 4 - codominance justification
A roan animal is not a blended pink colour; it has discrete patches of red hairs and white hairs, so both alleles are fully expressed in different follicle cells at the same time. Because both traits are visible side by side rather than averaged, this is codominance, not incomplete dominance.
core3 marks
A woman with blood type O claims a man with blood type AB is the father of her child, who has blood type B. Use genetics to determine whether the man could be the biological father.
Show worked solution →

Mark 1 - parental genotypes. Type O mother must be iiii. Type AB man must be IAIBI^A I^B.

Mark 2 - the cross. ii×IAIBii \times I^A I^B:

IAI^A IBI^B
ii IAiI^A i IBiI^B i
ii IAiI^A i IBiI^B i

Offspring are 12 IAi\tfrac{1}{2}\ I^A i (type A) and 12 IBi\tfrac{1}{2}\ I^B i (type B).

Mark 3 - conclusion. A type B child (IBiI^B i) is possible from this cross, because the mother contributes ii and the man can contribute IBI^B. Therefore the man cannot be excluded as the father on blood type alone (this does not prove he IS the father - other men of suitable genotype could also be).

exam6 marks
Snapdragon flower colour shows incomplete dominance and ABO blood group inheritance shows codominance with multiple alleles. Compare these two inheritance patterns, using Punnett squares and a worked cross for each, and account for why their heterozygote phenotypes differ at the molecular level.
Show worked solution →

A Band 6 response compares (identifies similarities AND differences), provides a correct Punnett square and ratio for each, and links the difference in heterozygote appearance to the molecular level.

Similarity (1 mark). Both are non-Mendelian: in each, the heterozygote phenotype differs from a simple dominant homozygote, so neither follows the classic 3:1 dominant-recessive ratio. Both still obey segregation, so a heterozygote x heterozygote cross gives a 1:2:11:2:1 genotypic ratio.

Incomplete dominance - snapdragons (1 mark, square + ratio). RRRR (red) ×rr\times rr (white) gives all RrRr pink F1. Rr×RrRr \times Rr:

R r
R RR Rr
r Rr rr

Phenotypes 11 red : 22 pink : 11 white.

Codominance / multiple alleles - ABO (1 mark, square + ratio). IAi×IBiI^A i \times I^B i:

IAI^A ii
IBI^B IAIBI^A I^B IBiI^B i
ii IAiI^A i iiii

Phenotypes 11 AB : 11 B : 11 A : 11 O. ABO also illustrates multiple alleles (IAI^A, IBI^B, ii): three alleles in the population give four phenotypes, though each person carries only two.

Difference in heterozygote phenotype (1 mark)
The incomplete-dominance heterozygote (RrRr) is an intermediate blend (pink); the codominance heterozygote (IAIBI^A I^B) shows both parental traits at once (both A and B antigens, blood type AB).
Molecular account (1 mark)
In incomplete dominance the single functional RR allele makes only enough red pigment for a pale (pink) flower - a dosage/quantity effect, so one dose looks intermediate. In codominance each allele encodes a different, fully functional product (IAI^A makes A antigen, IBI^B makes B antigen) and both products are made independently, so both appear together rather than averaging.
Communication (1 mark)
A clear, well-structured comparison that uses correct notation throughout (IAI^A, IBI^B, ii and a stated key) and explicitly states ratios scores the final mark.

Practise this

Sources & how we know this

ExamExplained